head 1.2; access; symbols; locks; strict; comment @# @; expand @b@; 1.2 date 2010.10.05.15.09.20; author ArlinStoltzfus; state Exp; branches; next 1.1; 1.1 date 2010.10.04.19.36.26; author ArlinStoltzfus; state Exp; branches; next ; desc @none @ 1.2 log @4-taxon test case in NEXUS format @ text @#NEXUS BEGIN TAXA; DIMENSIONS ntax=4; TAXLABELS Mus_musculus_CAA25899.1 [Mus musculus] Rattus_norvegicus_AAA21711.1 [Rattus norvegicus] Gallus_gallus_CAA25046.1 [Gallus gallus] Rattus_norvegicus_AAA41015.1 [Rattus norvegicus]; END; BEGIN CHARACTERS; DIMENSIONS nchar=20; FORMAT datatype=protein gap=- missing=?; MATRIX Mus_musculus_CAA25899.1 MGDVEKGKKIFVQKCAQCHT Rattus_norvegicus_AAA41015.1 MGDAEAGKKIFIQKCAQCHT Gallus_gallus_CAA25046.1 MGDIEKGKKIFVQKCSQCHT Rattus_norvegicus_AAA21711.1 MGDVEKGKKIFVQKCAQCHT; END; BEGIN TREES; TREE con_50_majrule = ((Mus_musculus_CAA25899.1:0.008307,Rattus_norvegicus_AAA21711.1:0.009662):0.024280[0.74],(Gallus_gallus_CAA25046.1:0.055226,Rattus_norvegicus_AAA41015.1:0.117358):0.040335[0.69]); END; BEGIN NOTES; text taxon=Mus_musculus_CAA25899.1 text='http://www.ubio.org/authority/metadata.php?lsid=urn:lsid:ubio.org:namebank:2481174' text taxon=Rattus_norvegicus_AAA41015.1 text='http://www.ubio.org/authority/metadata.php?lsid=urn:lsid:ubio.org:namebank:2481343' text taxon=Gallus_gallus_CAA25046.1 text='http://www.ubio.org/authority/metadata.php?lsid=urn:lsid:ubio.org:namebank:3854553' text taxon=Rattus_norvegicus_AAA21711.1 text='http://www.ubio.org/authority/metadata.php?lsid=urn:lsid:ubio.org:namebank:2481343' END; @ 1.1 log @4-taxon test case in NEXUS format @ text @d4 1 a4 1 TAXLABELS Mus_musculus_CAA25899.1 Rattus_norvegicus_AAA21711.1 Gallus_gallus_CAA25046.1 Rattus_norvegicus_AAA41015.1; d18 6 a23 1 @