head 1.39; access; symbols; locks; strict; comment @# @; 1.39 date 2007.03.06.17.30.00; author TWikiGuest; state Exp; branches; next 1.38; 1.38 date 2006.05.16.21.01.27; author GregorHagedorn; state Exp; branches; next 1.37; 1.37 date 2006.05.10.08.57.51; author GregorHagedorn; state Exp; branches; next 1.36; 1.36 date 2006.05.08.10.34.03; author GregorHagedorn; state Exp; branches; next 1.35; 1.35 date 2005.03.21.22.41.05; author JenniferForman; state Exp; branches; next 1.34; 1.34 date 2005.03.15.14.09.29; author GregorHagedorn; state Exp; branches; next 1.33; 1.33 date 2005.03.09.06.06.19; author BobMorris; state Exp; branches; next 1.32; 1.32 date 2005.01.20.13.00.15; author TrevorPaterson; state Exp; branches; next 1.31; 1.31 date 2004.12.21.13.27.47; author GregorHagedorn; state Exp; branches; next 1.30; 1.30 date 2004.12.14.09.56.24; author GregorHagedorn; state Exp; branches; next 1.29; 1.29 date 2004.12.10.17.40.46; author GregorHagedorn; state Exp; branches; next 1.28; 1.28 date 2004.12.06.15.12.24; author TrevorPaterson; state Exp; branches; next 1.27; 1.27 date 2004.12.02.11.15.10; author TrevorPaterson; state Exp; branches; next 1.26; 1.26 date 2004.11.19.11.36.06; author GregorHagedorn; state Exp; branches; next 1.25; 1.25 date 2004.11.18.10.47.30; author GregorHagedorn; state Exp; branches; next 1.24; 1.24 date 2004.11.09.21.34.29; author RichardPyle; state Exp; branches; next 1.23; 1.23 date 2004.11.09.16.35.27; author NozomiJamesYtow; state Exp; branches; next 1.22; 1.22 date 2004.11.08.17.03.06; author RichardPyle; state Exp; branches; next 1.21; 1.21 date 2004.11.08.16.20.11; author GregorHagedorn; state Exp; branches; next 1.20; 1.20 date 2004.11.08.14.47.43; author GregorHagedorn; state Exp; branches; next 1.19; 1.19 date 2004.11.04.09.47.25; author GregorHagedorn; state Exp; branches; next 1.18; 1.18 date 2004.11.03.21.52.00; author GregorHagedorn; state Exp; branches; next 1.17; 1.17 date 2004.11.03.11.37.00; author GregorHagedorn; state Exp; branches; next 1.16; 1.16 date 2004.11.03.10.37.12; author SallyHinchcliffe; state Exp; branches; next 1.15; 1.15 date 2004.11.02.11.36.27; author GregorHagedorn; state Exp; branches; next 1.14; 1.14 date 2004.11.01.09.50.00; author GregorHagedorn; state Exp; branches; next 1.13; 1.13 date 2004.10.31.18.38.00; author NozomiJamesYtow; state Exp; branches; next 1.12; 1.12 date 2004.10.31.07.12.00; author RichardPyle; state Exp; branches; next 1.11; 1.11 date 2004.10.31.05.54.34; author RichardPyle; state Exp; branches; next 1.10; 1.10 date 2004.10.30.21.31.42; author RichardPyle; state Exp; branches; next 1.9; 1.9 date 2004.10.29.22.59.05; author RichardPyle; state Exp; branches; next 1.8; 1.8 date 2004.10.29.21.53.48; author RichardPyle; state Exp; branches; next 1.7; 1.7 date 2004.10.29.21.09.00; author GregorHagedorn; state Exp; branches; next 1.6; 1.6 date 2004.10.28.18.42.10; author RichardPyle; state Exp; branches; next 1.5; 1.5 date 2004.10.28.08.15.00; author GregorHagedorn; state Exp; branches; next 1.4; 1.4 date 2004.10.26.23.09.18; author RichardPyle; state Exp; branches; next 1.3; 1.3 date 2004.10.26.15.24.43; author NozomiJamesYtow; state Exp; branches; next 1.2; 1.2 date 2004.10.26.12.57.00; author GregorHagedorn; state Exp; branches; next 1.1; 1.1 date 2004.10.26.09.53.00; author GregorHagedorn; state Exp; branches; next ; desc @none @ 1.39 log @Added topic name via script @ text @---+!! %TOPIC% %META:TOPICINFO{author="GregorHagedorn" date="1147813287" format="1.1" version="1.38"}% %META:TOPICPARENT{name="WebHome"}% Discussion on LinneanCore, a schema to exchange taxonomic name strings.

New Topics

LinneanCoreCanonicalName (name without authors)
LinneanCoreCanonicalAuthorship (author and citation elements)
ObjectIdentifierPattern (ids and GUIDs in LinneanCore - and actually anywhere)
LinneanCoreDisentangle (Appeal to separate hierarchy and canonical name as far as possible)
LinneanCoreNameIdentity (How many elements necessary for infrageneric/specific ranks?) LinneanCoreNomenclaturalStatus (legitimacy, conservation, etc. of names - later assessment)
LCNameCreationTypeDiscussion (sp. nov., comb. nov., autonym)
LinneanCoreHomoIsonym (issues of homonym isonym, and nomen novum/replacement name)
LinneanCoreHybridNothotaxa (issues about hybrid formulae and "notho"taxa [named hybrids])
LinneanCoreConceptSuffixString (provide a place in atomization for "s. lat." etc.?)
LinneanCoreUseCases (Activities for which LC is intended)
LinneanCoreResourceLinks (Links to BioCode, etc.)
LinneanCoreDefinitions (definitions of terms to be used in further discussions) LinneanCoreOriginalIntent
LinneanCoreDomain (What constitutes a unique LC unit or record)
LinneanCoreTCSInteraction (Issues related to LC as a subset of TCS
LinneanCoreMultipleStructuresForNames (Distinguishing "Nominal" from other types of Concepts).

Schema versions and example data

LinneanCoreCurrentVersion
LinneanCoreExampleNames (names from different kingdoms, hard cases etc.)
LinneanCoreTcsNameExamples (Napier TCS team's commentary on LinneanCoreExampleNames, with some XML examples of how nomenclatural information can be captured in a concept world).

Relevant enumerations of values (part of UBIF schema)

TaxonomicRankEnum (see also [[http://wiki.cs.umb.edu/twiki/pub/UBIF/EnumeratedValues/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]])
NomenclaturalTypeStatusOfSpecimensEnum
LinneanCoreNomenclaturalStatus (Unfinished - input most welcome!)
NomenclaturalCodesEnum (e.g. "Botanical/Zoological" for ICBN, ICZN, etc.)

Retired or closed Topics

Note: It is assumed that the discussion topics below are dormant (either resolved, or parsed/transferred into more specific topics in sections above). If you make changes of any of the pages linked below, please move the topic link out of this section. LinneanCoreAfterChristchurch (Rich's charter email, 2004-10-18)
LinneanCoreUrgency (Letter by Chris Lyal)
LinneanCoreChoiceOfName (LinneanCore or LinneausCore?) --- *New to WIKIs?* If you're an impatient sort, you should go here: Main.ThreeEasySteps. More information can be found in TWiki.WelcomeGuest. See Main.TWikiUsers for a list of UBIF subscribers. --- LinneanCoreContributions @ 1.38 log @none @ text @d1 2 @ 1.37 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1147251471" format="1.1" version="1.37"}% d35 2 a36 2 TaxonomicRankEum (see also [[http://wiki.cs.umb.edu/twiki/pub/UBIF/EnumeratedValues/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]])
NomenclaturalTypeStatusOfSpecimensEum
d53 1 a53 1 LinneanCoreContributions@ 1.36 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1147084443" format="1.1" version="1.36"}% d35 1 a35 1 TaxonomicRankEum (see also [[http://wiki.cs.umb.edu/twiki/pub/UBIF/EnumerationTypes/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]])
d53 1 a53 1 LinneanCoreContributions @ 1.35 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="JenniferForman" date="1111444865" format="1.0" version="1.35"}% d31 1 a31 1 TcsNameExamples (Napier TCS team's commentary on LinneanCoreExampleNames, with some XML examples of how nomenclatural information can be captured in a concept world). a53 1 @ 1.34 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1110895769" format="1.0" version="1.34"}% d35 1 a35 1 TaxonomicRankEum (see also [[http://efgblade.cs.umb.edu/twiki/pub/UBIF/EnumerationTypes/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]])
@ 1.33 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="BobMorris" date="1110348379" format="1.0" version="1.33"}% d36 1 a36 1 NomenclaturalTypeStatusOfUnitsEum
@ 1.32 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="TrevorPaterson" date="1106226015" format="1.0" version="1.32"}% d25 1 @ 1.31 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1103635667" format="1.0" version="1.31"}% d30 1 a30 1 TcsNameExamples NEW (Napier TCS team's commentary on LinneanCoreExampleNames, with some XML examples of how nomenclatural information can be captured in a concept world). @ 1.30 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1103018184" format="1.0" version="1.30"}% d13 2 a14 1 LinneanCoreNomenclaturalStatus (legitimacy, conservation, etc.)
d48 1 a48 1 *New to WIKIs?* If you're an impatient sort, you should go here: Main.ThreeEasySteps. More information can be found in TWiki.WelcomeGuest and TWiki.AboutTheWiki. See Main.TWikiUsers for a list of subscribers. @ 1.29 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1102700446" format="1.0" version="1.29"}% d9 1 a9 1 LinneanCoreIdentifiers (ids and GUIDs in LinneanCore - and actually anywhere)
@ 1.28 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="TrevorPaterson" date="1102345944" format="1.0" version="1.28"}% d19 3 a21 1 LinneanCoreDefinitions (definitions of terms to be used in further discussions)
d29 1 a29 2 TcsNameExamples NEW (Napier TCS team's commentary on LinneanCoreExampleNames,
with some XML examples of how nomenclatural information can be captured in a concept world).
d49 4 @ 1.27 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="TrevorPaterson" date="1101986110" format="1.0" version="1.27"}% d26 2 a27 2 LinneanCoreExampleNames (names from different kingdoms, hard cases etc.)
TcsNameExamples NEW (Napier TCS team's commentary on LinneanCoreExampleNames,
@ 1.26 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1100864166" format="1.0" version="1.26"}% d3 45 a47 42 Discussion on LinneanCore, a schema to exchange taxonomic name strings.

New Topics

LinneanCoreCanonicalName (name without authors)
LinneanCoreCanonicalAuthorship (author and citation elements)
LinneanCoreIdentifiers (ids and GUIDs in LinneanCore - and actually anywhere)
LinneanCoreDisentangle (Appeal to separate hierarchy and canonical name as far as possible)
LinneanCoreNameIdentity (How many elements necessary for infrageneric/specific ranks?) LinneanCoreNomenclaturalStatus (legitimacy, conservation, etc.)
LinneanCoreHomoIsonym (issues of homonym isonym, and nomen novum/replacement name)
LinneanCoreHybridNothotaxa (issues about hybrid formulae and "notho"taxa [named hybrids])
LinneanCoreConceptSuffixString (provide a place in atomization for "s. lat." etc.?)
LinneanCoreUseCases (Activities for which LC is intended)
LinneanCoreResourceLinks (Links to BioCode, etc.)
LinneanCoreDefinitions (definitions of terms to be used in further discussions)
LinneanCoreDomain (What constitutes a unique LC unit or record)
LinneanCoreTCSInteraction (Issues related to LC as a subset of TCS

Schema versions and example data

LinneanCoreCurrentVersion
LinneanCoreExampleNames (names from different kingdoms, hard cases etc.)

Relevant enumerations of values (part of UBIF schema)

TaxonomicRankEum (see also [[http://efgblade.cs.umb.edu/twiki/pub/UBIF/EnumerationTypes/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]])
NomenclaturalTypeStatusOfUnitsEum
LinneanCoreNomenclaturalStatus (Unfinished - input most welcome!)
NomenclaturalCodesEnum (e.g. "Botanical/Zoological" for ICBN, ICZN, etc.)

Retired or closed Topics

Note: It is assumed that the discussion topics below are dormant (either resolved, or parsed/transferred into more specific topics in sections above). If you make changes of any of the pages linked below, please move the topic link out of this section. LinneanCoreAfterChristchurch (Rich's charter email, 2004-10-18)
LinneanCoreUrgency (Letter by Chris Lyal)
LinneanCoreChoiceOfName (LinneanCore or LinneausCore?) --- *New to WIKIs?* If you're an impatient sort, you should go here: Main.ThreeEasySteps. More information can be found in TWiki.WelcomeGuest and TWiki.AboutTheWiki. See Main.TWikiUsers for a list of subscribers. @ 1.25 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1100774850" format="1.0" version="1.25"}% d32 1 a32 1 NomenclaturalStatusEnum (e.g. Rejected, Conserved, Sanctioned, etc. Unfinished - input most welcome!)
@ 1.24 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1100036069" format="1.0" version="1.24"}% d9 1 a9 1 LinneanCoreIdentifiers (ids and GUIDs in LinneanCore)
d11 3 a15 1 LinneanCoreNameIdentity (How many elements necessary for infrageneric/specific ranks?)
a16 1 LinneanCoreUrgency (Letter by Chris Lyal)
d39 1 @ 1.23 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="NozomiJamesYtow" date="1100018127" format="1.0" version="1.23"}% d12 1 @ 1.22 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099933386" format="1.0" version="1.22"}% d14 6 a19 6 LinneanCoreUrgency: Letter by Chris Lyal LinneanCoreUseCases: Activities for which LC is intended LinneanCoreResourceLinks: Links to BioCode, etc. LinneanCoreDefinitions: definitions of terms to be used in further discussions LinneanCoreDomain: What constitutes a unique LC unit or record) LinneanCoreTCSInteraction: Issues related to LC as a subset of TCS @ 1.21 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099930811" format="1.0" version="1.21"}% d34 1 @ 1.20 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099925263" format="1.0" version="1.20"}% d21 1 a21 1

Examples

d23 2 a24 5 LinneanCoreExampleNames: Examples of names from different kingdoms, hard cases etc.

Schema versions

LinneanCoreCurrentVersion @ 1.19 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099561645" format="1.0" version="1.19"}% d7 7 a13 1 LinneanCoreAfterChristchurch: Rich's charter email (2004-10-18) with discussion a19 5 LinneanCoreIdentifiers (ids and GUIDs in LinneanCore)
LinneanCoreDisentangle (Appeal to separate hierarchy and canonical name as far as possible)
LinneanCoreHomoIsonym (issues of homonym isonym, and nomen novum/replacement name)
LinneanCoreNameIdentity (How many elements necessary for infrageneric/specific ranks?)
LinneanCoreConceptSuffixString (provide a place in atomization for "s. lat." etc.?) d34 1 a34 1 NomenclaturalCodesEnum (e.g. "Botanical/Zoological" for ICBN, ICZN, etc.)
d36 1 a36 1

Closed Topics

d38 1 @ 1.18 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099518720" format="1.0" version="1.18"}% d17 2 a18 1 LinneanCoreNameIdentity (How many elements necessary for infrageneric/specific ranks?) @ 1.17 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099481820" format="1.0" version="1.17"}% d14 1 @ 1.16 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="SallyHinchcliffe" date="1099478232" format="1.0" version="1.16"}% d6 1 d15 2 a16 1 LinneanCoreHomoIsonym (issues of homonym isonym, and nomen novum/replacement name) d19 1 d23 2 a24 2 LinneanCoreCurrentVersion: LinneanCoreOriginalSubmission: (### Jerry - you want to add your original here or a link to your schema repository?) d27 5 a31 4 TaxonomicRankEum: WIKI topic and [[http://efgblade.cs.umb.edu/twiki/pub/UBIF/EnumerationTypes/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][formatted html page]] NomenclaturalTypeStatusOfUnitsEum: NomenclaturalStatusEnum: Rejected, Conserved, Sanctioned, etc. Unfinished: Input most welcome! NomenclaturalCodesEnum: "Botanical/Zoological" for ICBN, ICZN, etc. d34 2 a35 1 LinneanCoreChoiceOfName: LinneanCore or LinneausCore? @ 1.15 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099395387" format="1.0" version="1.15"}% d16 3 @ 1.14 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099302600" format="1.0" version="1.14"}% d13 2 a14 1 LinneanCoreDisentangle: @ 1.13 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="NozomiJamesYtow" date="1099247880" format="1.0" version="1.13"}% a6 2 LinneanCoreUseCases: LinneanCoreDisentangle: d8 1 d10 4 a13 4 LinneanCoreDefinitions: definitions of terms to be used in further discussions LinneanCoreDefinitionsDiscussion: active discussions related to each of the defined terms LinneanCoreDomain: Discussion page for fundamental issues about what constitutes a unique LC "unit" (record) LinneanCoreTCSInteraction: Discussion page for issues related to LC as a subset of TCS d22 2 a23 2 NomenclaturalStatusEnum: Rejected, Conserved, Sanctioned, etc. Not yet finished: Input most welcome! NomenclaturalCodesEnum: "Botanical" for ICBN, "Zoological" for ICZN, etc. @ 1.12 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099206720" format="1.0" version="1.12"}% d6 9 a14 9 * LinneanCoreAfterChristchurch (Rich's charter email (2004-10-18) with discussion) * LinneanCoreUseCases * LinneanCoreDisentangle * LinneanCoreUrgency (Letter by Chris Lyal) * LinneanCoreResourceLinks (Links to BioCode, etc.) * LinneanCoreDefinitions (definitions of terms to be used in further discussions) * LinneanCoreDefinitionsDiscussion (active discussions related to each of the defined terms) * LinneanCoreDomain (Discussion page for fundamental issues about what constitutes a unique LC "unit" (record) * LinneanCoreTCSInteraction (Discussion page for issues related to LC as a subset of TCS) d17 2 a18 2 * LinneanCoreCurrentVersion * LinneanCoreOriginalSubmission (### Jerry - you want to add your original here or a link to your schema repository?) d21 4 a24 5 * TaxonomicRankEum (WIKI topic) * [[http://efgblade.cs.umb.edu/twiki/pub/UBIF/EnumerationTypes/UBIF-Docu-Enumerations.html#TaxonomicRankEnum][TaxonomicRankEum]] (formatted html page) * NomenclaturalTypeStatusOfUnitsEum * not yet finished: NomenclaturalStatusEnum (Rejected, Conserved, Sanctioned, etc.) Input most welcome! * NomenclaturalCodesEnum ("Botanical" for ICBN, "Zoological" for ICZN, etc.) d27 1 a27 1 * LinneanCoreChoiceOfName (LinneanCore or LinneausCore?) @ 1.11 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099202074" format="1.0" version="1.11"}% d14 1 @ 1.10 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099171902" format="1.0" version="1.10"}% d11 2 a12 2 * LinneanCoreDefinitions (definitions of terms to be used in further discussions -- please feel free to modify) * LinneanCoreDefinitionsDiscussion (not yet active -- will be populated when definitions stabilize) @ 1.9 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099090745" format="1.0" version="1.9"}% d12 1 @ 1.8 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1099086828" format="1.0" version="1.8"}% d12 1 @ 1.7 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1099084140" format="1.0" version="1.7"}% d11 1 @ 1.6 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1098988930" format="1.0" version="1.6"}% d10 1 a10 1 * ElectronicBioCode (provided by Brian Tindall) @ 1.5 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1098951300" format="1.0" version="1.5"}% d10 1 @ 1.4 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="RichardPyle" date="1098832158" format="1.0" version="1.4"}% d3 1 a3 1 Discuss on LinneanCore (or LinnaeusCore or whatever), a schema to exchange taxonomic name strings. d5 1 a5 1

New Topics

d11 1 a11 1

Schema versions

d15 8 a22 1

Closed Topics

d24 4 @ 1.3 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="NozomiJamesYtow" date="1098804283" format="1.0" version="1.3"}% a8 1 * LinneanCoreChoiceOfName (LinneanCore or LinneausCore?) d16 1 a16 1 * (none yet, anybody can move a topic here if considered closed or resolved.) @ 1.2 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1098795420" format="1.0" version="1.2"}% a4 2 -- Main.NozomiJamesYtow - 26 Oct 2004 @ 1.1 log @none @ text @d1 1 a1 1 %META:TOPICINFO{author="GregorHagedorn" date="1098784380" format="1.0" version="1.1"}% d8 1 a8 1 * LinneanCoreCharter (Rich's charter email (2004-10-18) with discussion) a11 1 * LinneanCoreOriginalSubmission d14 4 d19 1 a19 2 * (none yet, anybody can move a topic here if considered closed or resolved.) @