854 lines
19 KiB
Plaintext
854 lines
19 KiB
Plaintext
head 1.29;
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access;
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symbols;
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locks; strict;
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comment @# @;
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1.29
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date 2007.06.09.12.47.46; author WalterBerendsohn; state Exp;
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branches;
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next 1.28;
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1.28
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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branches;
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1.27
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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branches;
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1.26
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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1.1
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date 2007.01.09.00.00.00; author MoinMoin; state Exp;
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next ;
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desc
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@Initial revision
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@
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1.29
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log
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@none
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@
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text
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@%META:TOPICINFO{author="WalterBerendsohn" date="1181393266" format="1.1" version="1.29"}%
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---++ Schema Changes from version 2.00 to version 2.06
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---+++ Schema changes effected
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v. 2.01: Added mandatory language attribute to <verbatim>LabelRepr</verbatim> (important for Contact Organisation).
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v. 2.01: Changed preferred attribute in <verbatim>anyUriP</verbatim> to lowercase
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v. 2.01: <verbatim> SchemaChangesDataSets/DataSet/Units/Unit/SpecimenUnit/Marks/Mark/IMAGE </verbatim>
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renamed to: <verbatim> SchemaChangesDataSets/DataSet/Units/Unit/SpecimenUnit/Marks/Mark/Images </verbatim>
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and added element: <verbatim>/Image</verbatim>, type string.
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v. 2.01: <verbatim>Gathering/SiteMeasurementsOrFacts/SiteMeasurementOrFact</verbatim> made unbounded.
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v. 2.01: <verbatim>/DataSets/DataSet/Metadata/Scope/GeoecologicalScope</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Metadata/Scope/GeoecologicalTerms</verbatim>
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v. 2.01: <verbatim>/DataSets/DataSet/Metadata/Scope/TaxonomicScope</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Metadata/Scope/TaxonomicTerms</verbatim>
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v. 2.01: <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgent/Organization</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgent/Organisation</verbatim>
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v. 2.03: Removed all <verbatim>/Annotation/AppInfo</verbatim> elements
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v. 2.03: <verbatim>/Unit/PlantGeneticRessourcesUnit/GatheringInstitutionCode</verbatim>
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added
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v. 2.03: <verbatim>/Unit/PlantGeneticRessourcesUnit/BreedingCountryCode</verbatim>
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added
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v. 2.04: <verbatim>/Unit/PlantGeneticRessourcesUnit/AccessionNames/AccessionName</verbatim>
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added
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v. 2.04: <verbatim>/Unit/PlantGeneticRessourcesUnit/AccessionNames/AccessionNameText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Strain</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Serovar</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/SerovarOrSerotype</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Pathovar</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Identification/Identifier/IdentifiersText</verbatim>
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made optional
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgentsText</verbatim>
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made optional
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v. 2.05 <verbatim>..[[Contact][type]]/TelephoneNumbers/TelephoneNumber/Device</verbatim>
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made optional
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v. 2.05 <verbatim>..[[MeasurementOrFact][type]]/MeasurementOrFactAtomised/IsQuantitative</verbatim>
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made optional
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/AnnotationText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/AnnotationDate</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/Annotator</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/BotanicalGardenUnit/PlantingDate</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMDatum</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMSubzone</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMZoneFull</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNS</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMMethod</verbatim>
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deleted
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMEastWest</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMEasting</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNorthSouth</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNorthing</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesText</verbatim>
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moved to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesLatLong/CoordinatesText</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesLatLon/IsoAccuracy</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Permits/Permit</verbatim>
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made unbounded
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/IdentifierPersonName</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/PersonName</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/SpecimenUnit/DuplicatesDistributedTo</verbatim>
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added
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/Extension</verbatim>
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added
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/DateLastEdited</verbatim>
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type changed from xs:date to xs:dateTime
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/HybridFlag </verbatim>
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restriction to "+" or "x" added
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/HybridFlag SchemaChanges@@insertionpoint</verbatim>
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added
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@
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1.28
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log
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@Revision 28
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@
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text
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@d1 166
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a166 172
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---++ Schema Changes from version 2.00 to version 2.06
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---+++ Schema changes effected
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v. 2.01: Added mandatory language attribute to <verbatim>LabelRepr</verbatim> (important for Contact Organisation).
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v. 2.01: Changed preferred attribute in <verbatim>anyUriP</verbatim> to lowercase
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v. 2.01: <verbatim> SchemaChangesDataSets/DataSet/Units/Unit/SpecimenUnit/Marks/Mark/IMAGE </verbatim>
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renamed to: <verbatim> SchemaChangesDataSets/DataSet/Units/Unit/SpecimenUnit/Marks/Mark/Images </verbatim>
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and added element: <verbatim>/Image</verbatim>, type string.
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v. 2.01: <verbatim>Gathering/SiteMeasurementsOrFacts/SiteMeasurementOrFact</verbatim> made unbounded.
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v. 2.01: <verbatim>/DataSets/DataSet/Metadata/Scope/GeoecologicalScope</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Metadata/Scope/GeoecologicalTerms</verbatim>
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v. 2.01: <verbatim>/DataSets/DataSet/Metadata/Scope/TaxonomicScope</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Metadata/Scope/TaxonomicTerms</verbatim>
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v. 2.01: <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgent/Organization</verbatim>
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renamed to: <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgent/Organisation</verbatim>
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v. 2.03: Removed all <verbatim>/Annotation/AppInfo</verbatim> elements
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v. 2.03: <verbatim>/Unit/PlantGeneticRessourcesUnit/GatheringInstitutionCode</verbatim>
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added
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v. 2.03: <verbatim>/Unit/PlantGeneticRessourcesUnit/BreedingCountryCode</verbatim>
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added
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v. 2.04: <verbatim>/Unit/PlantGeneticRessourcesUnit/AccessionNames/AccessionName</verbatim>
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added
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v. 2.04: <verbatim>/Unit/PlantGeneticRessourcesUnit/AccessionNames/AccessionNameText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Strain</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Serovar</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/SerovarOrSerotype</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/CultureCollectionUnit/Pathovar</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Identification/Identifier/IdentifiersText</verbatim>
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made optional
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgentsText</verbatim>
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made optional
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v. 2.05 <verbatim>..[[Contact][type]]/TelephoneNumbers/TelephoneNumber/Device</verbatim>
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made optional
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v. 2.05 <verbatim>..[[MeasurementOrFact][type]]/MeasurementOrFactAtomised/IsQuantitative</verbatim>
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made optional
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/AnnotationText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/AnnotationDate</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/EAnnotations/Annotation/Annotator</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/BotanicalGardenUnit/PlantingDate</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMDatum</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMSubzone</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMZoneFull</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNS</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMText</verbatim>
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added
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMMethod</verbatim>
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deleted
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMEastWest</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMEasting</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNorthSouth</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CordinatesUTM/UTMNorthing</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesText</verbatim>
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moved to <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesLatLong/CoordinatesText</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Cordinates/CoordinatesLatLon/IsoAccuracy</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Gathering/Permits/Permit</verbatim>
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made unbounded
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/IdentifierPersonName</verbatim>
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renamed to <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/PersonName</verbatim>
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/SpecimenUnit/DuplicatesDistributedTo</verbatim>
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added
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/Extension</verbatim>
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/DateLastEdited</verbatim>
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type changed from xs:date to xs:dateTime
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/HybridFlag </verbatim>
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restriction to "+" or "x" added
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v. 2.06 <verbatim>/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/HybridFlag SchemaChanges@@insertionpoint</verbatim>
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---+++ Under discussion
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Hybrids in Zoology?
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Inclusion of <verbatim>Parameter</verbatim> in <verbatim>MesurementOrFact</verbatim> type. Better to have this as an extension of the type, because it is not needed where the schema is explicit about the parameter (e.g. <verbatim>Altitude</verbatim>).
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Mandatory elements for Scientific name, language attribute
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---++ Developments since Version 2.00
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v. 2.06 SchemaChangesDataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/HybridFlag SchemaChanges@@insertionpoint
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The Hybrid Flag in Botanical Name Atomised seems to lack the attribute to indicate its insertion point (before genus name, species epithet, or the rank indication of a an infraspecific name.
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1.21
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@a148 4
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---+++ Proposed changes
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Rename: <verbatim>ISO3166Code</verbatim> to <verbatim>ISO3166CodeL</verbatim> Add: <verbatim>ISO3166CodeN</verbatim> ?? Anybody remembering what this was?
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d151 1
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a151 1
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Inclusion of <verbatim>Parameter</verbatim> in <verbatim>MesurementOrFact</verbatim> type. Better to have this as an extension of the type, because it is not needed where the schema is explicit about the parameter (e.g. <verbatim>Altitude</verbatim>)?
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@d147 1
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Rename: <verbatim>ISO3166Code</verbatim> to <verbatim>ISO3166CodeL</verbatim>
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Add: <verbatim>ISO3166CodeN</verbatim>
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---+++ Proposed changes
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Rename: <verbatim>IdentifierPersonName</verbatim> -><verbatim>PersonName</verbatim>
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a145 1
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Change <verbatim>Gathering/Permits/Permit</verbatim> should be unbounded
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Mandatory elements for Collector team, Scientific name, language attribute
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<verbatim>We just tried to map the GatheringAgents in abcd2.0.
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In this case there is a repeatable element (GatheringAgent) below the AltText field (GatheringAgentsText):
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Agents 0/1
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GatheringAgent 0/∞
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primarycollector [optional]
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sequence [optional]
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AgentText 0/1 smpl-type [String]
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Organization 0/1 cmpl-type [Organisation]
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Person 0/1 cmpl-type [PersonName]
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GatheringAgentsText 1/1
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In our training DB we have several collectors per unit, which we map against the GatheringAgent/Person/xxx elements.
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But because the aggregated AltText field GatheringAgentsText is mandatory, we also need to map this!
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It is very hard though to do a aggregating concatenation of strings in nearly all databases except postgres. Even SQL Server needs custom written functions for this.
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So what will happen is that nobody will map any collector at all !
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I think we should be VERY careful with mandatory elements - even in relative situations like this one.
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So I suggest to make this AltText field optional.
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Anyone with different opinion on this?
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</verbatim>
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---+++ Documentation problems
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Concept for language attribute in <verbatim>LabelRepr</verbatim> is missing throughout (!Organisation)
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v. 2.05 <verbatim>/DataSets/DataSet/Units/Unit/Identification/Identifier/IdentifiersText}}
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1.10
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v. 2.03: <verbatim>/Unit/PGRUnit/GatheringInstitutionCode</verbatim>
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d33 1
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a33 1
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added*ADD TO WIKI* FAO Institute Code of the institute that has collected the material.
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v. 2.03: <verbatim>/Unit/PGRUnit/BreedingCountryCode</verbatim>
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added*ADD TO WIKI* ISO 3-letter code for the country where the breeding institute is located.
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@d33 5
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added*ADD TO WIKI*
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@Revision 8
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@Revision 5
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@d33 23
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@Revision 4
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@d11 1
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renamed to: <verbatim> SchemaChangesDataSets/DataSet/Units/Unit/SpecimenUnit/Marks/Mark/Images </verbatim>
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d13 3
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a15 1
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and added element: <verbatim>/Image</verbatim>, type string.
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1.3
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@Revision 3
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@d27 2
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@d19 6
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1.1
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@Initial revision
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@d15 1
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a15 1
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---+++ Proposed changes
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@
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