From 8c97f73b7a6ed5d4a87344b0215bda0542a1e7d8 Mon Sep 17 00:00:00 2001 From: tucotuco Date: Sat, 30 Sep 2017 14:38:41 -0400 Subject: [PATCH] Moved examples to the Darwin Core Questions & Answers repository. --- .../SimpleDwCCSVheaderUTF8WithNamespaces.txt | 1 - downloads/SimpleDwCMSExcel.xls | Bin 17920 -> 0 bytes .../SimpleDwCTermsListWithNamespaces.txt | 170 ----------------- examples/examples_material_sample.md | 15 -- examples/examples_observation.md | 43 ----- examples/examples_rdfa.md | 128 ------------- examples/examples_specimen.md | 98 ---------- examples/examples_taxon.md | 133 ------------- examples/index.html | 117 ------------ examples/xml/example_classes_observation.xml | 99 ---------- examples/xml/example_classes_specimen.xml | 108 ----------- examples/xml/example_simple.xml | 176 ------------------ 12 files changed, 1088 deletions(-) delete mode 100644 downloads/SimpleDwCCSVheaderUTF8WithNamespaces.txt delete mode 100644 downloads/SimpleDwCMSExcel.xls delete mode 100644 downloads/SimpleDwCTermsListWithNamespaces.txt delete mode 100644 examples/examples_material_sample.md delete mode 100644 examples/examples_observation.md delete mode 100644 examples/examples_rdfa.md delete mode 100644 examples/examples_specimen.md delete mode 100644 examples/examples_taxon.md delete mode 100644 examples/index.html delete mode 100644 examples/xml/example_classes_observation.xml delete mode 100644 examples/xml/example_classes_specimen.xml delete mode 100644 examples/xml/example_simple.xml diff --git a/downloads/SimpleDwCCSVheaderUTF8WithNamespaces.txt b/downloads/SimpleDwCCSVheaderUTF8WithNamespaces.txt deleted file mode 100644 index 501e9be..0000000 --- a/downloads/SimpleDwCCSVheaderUTF8WithNamespaces.txt +++ /dev/null @@ -1 +0,0 @@ -"dcterms:type","dcterms:modified","dcterms:language","dcterms:license","dcterms:rightsHolder","dcterms:accessRights","dcterms:bibliographicCitation","dcterms:references","dwc:institutionID","dwc:collectionID","dwc:datasetID","dwc:institutionCode","dwc:collectionCode","dwc:datasetName","dwc:ownerInstitutionCode","dwc:basisOfRecord","dwc:informationWithheld","dwc:dataGeneralizations","dwc:dynamicProperties","dwc:occurrenceID","dwc:catalogNumber","dwc:recordNumber","dwc:recordedBy","dwc:individualCount","dwc:organismQuantity","dwc:organismQuantityType","dwc:sex","dwc:lifeStage","dwc:reproductiveCondition","dwc:behavior","dwc:establishmentMeans","dwc:occurrenceStatus","dwc:preparations","dwc:disposition","dwc:associatedMedia","dwc:associatedReferences","dwc:associatedSequences","dwc:associatedTaxa","dwc:otherCatalogNumbers","dwc:occurrenceRemarks","dwc:organismID","dwc:organismName","dwc:organismScope","dwc:associatedOccurrences","dwc:associatedOrganisms","dwc:previousIdentifications","dwc:organismRemarks","dwc:materialSampleID","dwc:eventID","dwc:parentEventID","dwc:fieldNumber","dwc:eventDate","dwc:eventTime","dwc:startDayOfYear","dwc:endDayOfYear","dwc:year","dwc:month","dwc:day","dwc:verbatimEventDate","dwc:habitat","dwc:samplingProtocol","dwc:samplingEffort","dwc:sampleSizeValue","dwc:sampleSizeUnit","dwc:fieldNotes","dwc:eventRemarks","dwc:locationID","dwc:higherGeographyID","dwc:higherGeography","dwc:continent","dwc:waterBody","dwc:islandGroup","dwc:island","dwc:country","dwc:countryCode","dwc:stateProvince","dwc:county","dwc:municipality","dwc:locality","dwc:verbatimLocality","dwc:minimumElevationInMeters","dwc:maximumElevationInMeters","dwc:verbatimElevation","dwc:minimumDepthInMeters","dwc:maximumDepthInMeters","dwc:verbatimDepth","dwc:minimumDistanceAboveSurfaceInMeters","dwc:maximumDistanceAboveSurfaceInMeters","dwc:locationAccordingTo","dwc:locationRemarks","dwc:decimalLatitude","dwc:decimalLongitude","dwc:geodeticDatum","dwc:coordinateUncertaintyInMeters","dwc:coordinatePrecision","dwc:pointRadiusSpatialFit","dwc:verbatimCoordinates","dwc:verbatimLatitude","dwc:verbatimLongitude","dwc:verbatimCoordinateSystem","dwc:verbatimSRS","dwc:footprintWKT","dwc:footprintSRS","dwc:footprintSpatialFit","dwc:georeferencedBy","dwc:georeferencedDate","dwc:georeferenceProtocol","dwc:georeferenceSources","dwc:georeferenceVerificationStatus","dwc:georeferenceRemarks","dwc:geologicalContextID","dwc:earliestEonOrLowestEonothem","dwc:latestEonOrHighestEonothem","dwc:earliestEraOrLowestErathem","dwc:latestEraOrHighestErathem","dwc:earliestPeriodOrLowestSystem","dwc:latestPeriodOrHighestSystem","dwc:earliestEpochOrLowestSeries","dwc:latestEpochOrHighestSeries","dwc:earliestAgeOrLowestStage","dwc:latestAgeOrHighestStage","dwc:lowestBiostratigraphicZone","dwc:highestBiostratigraphicZone","dwc:lithostratigraphicTerms","dwc:group","dwc:formation","dwc:member","dwc:bed","dwc:identificationID","dwc:identificationQualifier","dwc:typeStatus","dwc:identifiedBy","dwc:dateIdentified","dwc:identificationReferences","dwc:identificationVerificationStatus","dwc:identificationRemarks","dwc:taxonID","dwc:scientificNameID","dwc:acceptedNameUsageID","dwc:parentNameUsageID","dwc:originalNameUsageID","dwc:nameAccordingToID","dwc:namePublishedInID","dwc:taxonConceptID","dwc:scientificName","dwc:acceptedNameUsage","dwc:parentNameUsage","dwc:originalNameUsage","dwc:nameAccordingTo","dwc:namePublishedIn","dwc:namePublishedInYear","dwc:higherClassification","dwc:kingdom","dwc:phylum","dwc:class","dwc:order","dwc:family","dwc:genus","dwc:subgenus","dwc:specificEpithet","dwc:infraspecificEpithet","dwc:taxonRank","dwc:verbatimTaxonRank","dwc:scientificNameAuthorship","dwc:vernacularName","dwc:nomenclaturalCode","dwc:taxonomicStatus","dwc:nomenclaturalStatus","dwc:taxonRemarks" 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zca=T|omF}m`kvAw&}&Llkf-!0G^X?zG_LeGG^+FjR8)ErDk(h$eNpN2kX8BuR91Q# z@|C^_-LLcvbW-VAsG{^7R8{&C6exWe3YDIRYDzCa4=8;Fij-c2Vx_M_iPG1gy3*I7 zXOv!oCX`-=PAPo@I<53gXj180&>5vypa+${4Lzjv9q4mPuR;$ieHVH}=`1v*^gZZN zrPrXxl)eu=uJi-w38mMeCzalSo>F=f`aD!#2L7w^L`Cp#*FC+{R78B(CuRQDDN09dbWx`rQjUev_9?VCXbE}b-Gsbz5Pgn?eA8IAHi_L|^oh!n zB&x_q1*I-Ntr)kBMC8q@X@RB%nignUplN}o1)3IUTA*oxrUjZ7Xj-6Yfj>$M$V0I_ zSIcv_JUh1$`253t(<;yTd=}!KvgLVNp55i)c^P3jLH^x`6~ywDsXXtmCafXIGrznS zko1d**AXruTuN9^kcaTg2$KFDLE`51|6_q+zO)MYPO6Kq8Uy0Uec#03oaeQcuSast z#gDq$<(L1L*!{Xs9@D!SzcSuA9;5Y$uf#^39w&40dB^-K5Zb=zalQrjixYCS@dag_ zFVU)eLnnP7#0q0hCy^w4+ZMVn)6(1@{M}6ZGKXaToNxQ`j?BF%BWmN@(va`)L - - - -Scientific Name in RDFa - - - - - -

This example shows how to tag a scientific name with RDFa markup so that a - parser can recognize that the string -Bufo marinus -as a scientific name, and the string "Bufonidae -is a family name, but there is no statement that the B. marinus is a -member of the family Bufonidae.

- - -``` - -#### Example 2: Name with simple context - -This example wraps the scientific name and family within a named node, implying that the two are properties about the node rather than the whole document. This in turn infers that the scientific name is a member of the family, although this information is only contained in the human readable descriptions of the Darwin Core terms and can not be directly inferred from the RDF. - -* [Source](http://darwincore.googlecode.com/svn/trunk/examples/rdfa_content/sciname_2.html) -* [RDF](http://www.siatec.net/rdfaparser/index.php?xml=http%3A%2F%2Fdarwincore.googlecode.com%2Fsvn%2Ftrunk%2Fexamples%2Frdfa_content%2Fsciname_2.html) -* [RDF Visualized](http://www.w3.org/RDF/Validator/ARPServlet?URI=http%3A%2F%2Fwww.siatec.net%2Frdfaparser%2Findex.php%3Fxml%3Dhttp%253A%252F%252Fdarwincore.googlecode.com%252Fsvn%252Ftrunk%252Fexamples%252Frdfa_content%252Fsciname_2.html&PARSE=Parse+URI%3A+&TRIPLES_AND_GRAPH=PRINT_BOTH&FORMAT=PNG_EMBED) - -```HTML - - - - -Scientific Name in RDFa - - - - - -

This example shows how to tag a scientific name with RDFa markup so that a - parser can recognize that the string - -Bufo marinus -as a scientific name, and the string "Bufonidae -is a family name, and since both terms form part of a Darwin Core record, -infers that Bufonidae is the family name for "#name1"e; and Bufo marinus -is the scientific name.

- - -``` - -### Example 3 Observation with name and location - -Describes an observation in a HTML document using RDFa notation. This minimal example expresses the location two ways- using the Darwin Core DecimalLatitude and DecimalLongitude terms and the GeoRSS point. - -* [Source](http://darwincore.googlecode.com/svn/trunk/examples/rdfa_content/sciname_location.html) -* [RDF](http://www.siatec.net/rdfaparser/index.php?xml=http%3A%2F%2Fdarwincore.googlecode.com%2Fsvn%2Ftrunk%2Fexamples%2Frdfa_content%2Fsciname_location.html RDF) -* [RDF Visualized](http://www.w3.org/RDF/Validator/ARPServlet?URI=http%3A%2F%2Fwww.siatec.net%2Frdfaparser%2Findex.php%3Fxml%3Dhttp%253A%252F%252Fdarwincore.googlecode.com%252Fsvn%252Ftrunk%252Fexamples%252Frdfa_content%252Fsciname_location.html&PARSE=Parse+URI%3A+&TRIPLES_AND_GRAPH=PRINT_BOTH&FORMAT=PNG_EMBED) - -```HTML - - - - -Scientific Name in RDFa - - - - - -

This example document contains a record with of an observation tagged with an lsid of xxx - - that includes the scientific name - Bufo marinus, - - - a geographic location of - - longitude 152.725067 east, - latitude -25.273262, - - and a time of - - 9:32 in the morning of the 12th of November. - -

- - -``` diff --git a/examples/examples_specimen.md b/examples/examples_specimen.md deleted file mode 100644 index 2fe7dfa..0000000 --- a/examples/examples_specimen.md +++ /dev/null @@ -1,98 +0,0 @@ -## Examples - Specimens - -This page shows examples of how to populate Darwin Core terms for Specimen records. - -##### Preserved Specimen - -Model: Single whole native organism collected in the wild and put into a collection. - -``` -type=PhysicalObject -modified = 2009-02-12T12:43:31 -language = en -license = http://creativecommons.org/publicdomain/zero/1.0/legalcode -rightsHolder = Regents of the University of California -accessRights = http://vertnet.org/resources/norms.html -references = http://arctos.database.museum/guid/MVZ:Mamm:14523 -institutionID = http://biocol.org/urn:lsid:biocol.org:col:34777 -collectionID = http://grbio.org/cool/0rht-pj95 -institutionCode = MVZ -collectionCode = Mammals -basisOfRecord = PreservedSpecimen -occurrenceID = urn:occurrence:Arctos:MVZ:Mamm:14523:770093 -catalogNumber = 14523 -recordNumber = 8962 -recordedBy = Harry S. Swarth, W. L. Chandler -individualCount = 1 -sex = male -establishmentMeans = native -occurrenceStatus = present -preparations = skull | study skin -disposition = in collection -organismID = http://arctos.database.museum/guid/MVZ:Mamm:14523 -eventDate = 1911-05-14 -startDayOfYear = 134 -endDayOfYear = 134 -year = 1911 -month = 5 -day = 14 -verbatimEventDate = 14 May 1911 -higherGeography = North America | United States | California | Kern County -country = United States -countryCode = US -stateProvince = California -county = Kern -Locality = 8 mi NE Bakersfield -verbatimlocality = Bakersfield, 8 mi NE; North America, United States, California, Kern County -decimalLatitude = 35.45038 -decimalLongitude = -118.9092 -geodeticDatum = North American Datum 1927 -coordinateUncertaintyInMeters = 13696 -coordinatePrecision = 0.00001 -verbatimCoordinates = 35.45038/-118.9092 -verbatimCoordinateSystem = decimal degrees -georeferencedBy = Kristina Yamamoto -georeferencedDate = 2005-12-21 -georeferenceProtocol = VertNet Georeferencing Guidelines -georeferenceSources = Terrain Navigator Pro version 7.0 USGS 1:24,000 -georeferenceVerificationStatus = unverified -scientificName = Perognathus inornatus inornatus -higherClassification = Animalia | Chordata | Mammalia | Rodentia | Heteromyidae | Heteromyidae -kingdom = Animalia -phylum = Chordata -class = Mammalia -order = Rodentia -family = Heteromyidae -genus = Heteromyidae -specificEpithet = inornatus -infraspecificEpithet = inornatus -taxonRank = subspecies -nomenclaturalCode = ICZN - -``` - -Model: Whole organism recorded (any combination of sound, image, video, field notes) in the wild and entered in a collection database. - -Model: Whole organism captured, recorded (sound, image, video) along with measurements, released in the wild and entered in a collection database. - -Model: Whole organism collected from captivity and put into a collection. - -Model: Whole organism collected from the wild, but escaped from captivity, and put into a collection. - -Model: Parasite of organism, parasite cataloged with specimen of organism. - -Model: Parasite of organism, parasite cataloged separate from specimen (in the same or in a different collection). - -Model: Record of organism, where specimen is now in another collection. - -Model: Repeated instances of material sample for the same organism over time, then organism put into a collection. - -Model: Repeated instances of material sample for the same captive organism over time, then organism put into a collection. - -Model: Repeated instances of the same organism (with media, literature) captured over time. - -Model: Multiple organisms collected in the wild together, put into a collection and cataloged as a lot. - -##### Fossil specimen - -##### Living specimen diff --git a/examples/examples_taxon.md b/examples/examples_taxon.md deleted file mode 100644 index 86f546e..0000000 --- a/examples/examples_taxon.md +++ /dev/null @@ -1,133 +0,0 @@ -## Examples - Taxa - -This page shows examples of how to populate Darwin Core terms for Taxon records. - -### Species Checklists - -#### Taxonomic treatment, normalized - -Taxon records comprising a single accepted subspecies extracted from Mammal Species of the World, 3rd Edition with its normalised classification hierarchy and synonyms. See the denormalized example below. - -``` -taxonID = 1 -scientificName = Mammalia -taxonRank = class -taxonomicStatus = valid -nomenclaturalCode = ICZN - -taxonID = 10400001 -parentNameUsageID = 1 -scientificName = Didelphimorphia Gill, 1872 -scientificNameAuthorship = Gill, 1872 -taxonRank = order -taxonomicStatus = valid -nomenclaturalCode = ICZN -taxonRemarks = Traditionally included in Marsupialia; included in Ameridelphia (see Aplin and Archer, 1987; Marshall et al., 1990; and Szalay, 1982); but not Microbiotheriidae (Marshall et al., 1990; contra Reig et al., 1987). -references = http://www.bucknell.edu/msw3/browse.asp?id=10400001 - -taxonID = 10400002 -parentNameUsageID = 10400001 -scientificName = Didelphidae Gray, 1821 -scientificNameAuthorship = Gray, 1821 -taxonRank = family -taxonomicStatus = valid -nomenclaturalCode = ICZN -namePublishedIn = London Med. Repos., 15: 308. -taxonRemarks = Placed in the order Polyprotodontia by Kirsch (1977); also see Aplin and Archer (1987). Does not include Dromiciops; see Kirsch and Calaby (1977). Includes Caluromyidae, Glironiidae, and Marmosidae sensu Hershkovitz (1992a). -references = http://www.bucknell.edu/msw3/browse.asp?id=10400002 - -taxonID = 10400030 -parentNameUsageID = 10400002 -scientificName = Didelphinae Gray, 1821 -scientificNameAuthorship = Gray, 1821 -taxonRank = subfamily -taxonomicStatus = valid -nomenclaturalCode = ICZN -namePublishedIn = London Med. Repos., 15: 308. -taxonRemarks = Hershkovitz (1992a) restricted the Didelphinae to the genera Chironectes, Didelphis, Philander, and Lutreolina. Hershkovitz (1997) further restricted the Didelphinae by establishing Chironectinae and Lutreolininae for Chironectes and Lutreolina, respectively. -references = http://www.bucknell.edu/msw3/browse.asp?id=10400030 - -taxonID = 10400152 -parentNameUsageID = 10400030 -scientificName = Philander Brisson, 1762 -scientificNameAuthorship = Brisson, 1762 -taxonRank = genus -taxonomicStatus = valid -typeStatus = Type Species: Didelphis opossum Linnaeus, 1758, by plenary action (Opinion 1894 of the International Commission on Zoological Nomenclature, 1998). -nomenclaturalCode = ICZN -namePublishedIn = Regnum animale: 13. -taxonRemarks = Pine (1973) used Metachirops for this genus, as did Hall (1981), Husson (1978), and Corbet and Hill (1980; but not 1991 when they used Philander). -references = http://www.bucknell.edu/msw3/browse.asp?id=10400152 - -taxonID = 10400156 -parentNameUsageID = 10400152 -scientificName = Philander opossum Linnaeus, 1758 -scientificNameAuthorship = Linnaeus, 1758 -taxonRank = species -taxonomicStatus = valid -nomenclaturalCode = ICZN -namePublishedIn = Syst. Nat., 10th ed., 1: 55. -taxonRemarks = Corbet and Hill (1980), Hall (1981), Husson (1978), and Pine (1973) used Metachirops opossum for this species. Reviewed by Castro-Arellano et al. (2000, Mammalian Species, 638). The name D. larvata Jentink, 1888, is a nomen nudum. Didelphis opossum Linnaeus, 1758, is the type species for Holothylax Cabrera, 1919. -vernacularName = Gray Four-eyed Opossum -references = http://www.bucknell.edu/msw3/browse.asp?id=10400156 - -taxonID = 10400158 -parentNameUsageID = 10400156 -scientificName = Philander opossum canus Osgood, 1913 -scientificNameAuthorship = Osgood, 1913 -taxonRank = subspecies -taxonomicStatus = valid -nomenclaturalCode = ICZN -references = http://www.bucknell.edu/msw3/browse.asp?id=10400158 - -acceptedNameUsageID=10400158 -scientificName=Philander opossum crucialis (Thomas, 1923) -taxonRank=subspecies -taxonomicStatus=synonym -nomenclaturalCode=ICZN -``` - -##### Taxonomic treatment, denormalised - -Same information as in the normalized version above, but given in a denormalised form with implicit higher taxa. - -``` -taxonID = 10400156 -scientificName = Philander opossum Linnaeus, 1758 -scientificNameAuthorship = Linnaeus, 1758 -taxonRank = species -taxonomicStatus = valid -nomenclaturalCode = ICZN -namePublishedIn = Syst. Nat., 10th ed., 1: 55. -taxonRemarks = Corbet and Hill (1980), Hall (1981), Husson (1978), and Pine (1973) used Metachirops opossum for this species. Reviewed by Castro-Arellano et al. (2000, Mammalian Species, 638). The name D. larvata Jentink, 1888, is a nomen nudum. Didelphis opossum Linnaeus, 1758, is the type species for Holothylax Cabrera, 1919. -vernacularName = Gray Four-eyed Opossum -kingdom = Animalia -class = Mammalia -order = Didelphimorphia -family = Didelphidae -genus = Philander - -taxonID = 10400158 -scientificName = Philander opossum canus Osgood, 1913 -scientificNameAuthorship = Osgood, 1913 -taxonRank = subspecies -taxonomicStatus = valid -nomenclaturalCode = ICZN -kingdom = Animalia -class = Mammalia -order = Didelphimorphia -family = Didelphidae -genus = Philander - -scientificName = Philander opossum crucialis (Thomas, 1923) -taxonRank = subspecies -taxonomicStatus = synonym -acceptedNameUsage = Philander opossum canus -nomenclaturalCode = ICZN -``` - -##### Nomenclatural name records - -##### Invasive species checklist - -##### Redlist diff --git a/examples/index.html b/examples/index.html deleted file mode 100644 index 2f0aafc..0000000 --- a/examples/index.html +++ /dev/null @@ -1,117 +0,0 @@ - - - - - - Darwin Core examples - - - - - - - - - - - - - - - - - - - - - - - -
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Examples

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Following are links to examples of marking up data in Darwin Core:

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Creative Commons License

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- - - - - - - diff --git a/examples/xml/example_classes_observation.xml b/examples/xml/example_classes_observation.xml deleted file mode 100644 index 033b1d5..0000000 --- a/examples/xml/example_classes_observation.xml +++ /dev/null @@ -1,99 +0,0 @@ - - - - http://guid.mvz.org/sites/arg/127 - Argentina - AR - Neuquén - Valle Limay, Estancia Rincon Grande, 48 ha area with centroid at this point - -40.97467 - -71.0734 - epsg:4326 - 200 - - - http://guid.mvz.org/events/2006/11/26/17 - 2006-11-26T00:00:00 - area count - http://guid.mvz.org/sites/arg/127 - - - urn:catalog:AUDCLO:EBIRD:OBS64515288 - Event - 2009-02-17T07:33:04Z - AUDCLO - EBIRD - HumanObservation - 2 - http://guid.mvz.org/events/2006/11/26/17 - - - Anthus hellmayri - Aves - Anthus - hellmayri - urn:catalog:AUDCLO:EBIRD:OBS64515288 - - - urn:catalog:AUDCLO:EBIRD:OBS64515286 - Event - 2009-02-17T07:33:04Z - AUDCLO - EBIRD - HumanObservation - 1 - http://guid.mvz.org/events/2006/11/26/17 - - - Anthus correndera - Aves - Anthus - correndera - urn:catalog:AUDCLO:EBIRD:OBS64515286 - - - http://guid.mvz.org/events/2006/11/27/6 - 2006-11-27T00:00:00 - area count - http://guid.mvz.org/sites/arg/127 - - - urn:catalog:AUDCLO:EBIRD:OBS64515333 - Event - 2009-02-17T07:33:04Z - AUDCLO - EBIRD - HumanObservation - 1 - http://guid.mvz.org/events/2006/11/27/6 - - - Anthus hellmayri - Aves - Anthus - hellmayri - urn:catalog:AUDCLO:EBIRD:OBS64515333 - - - urn:catalog:AUDCLO:EBIRD:OBS64515331 - Event - 2009-02-17T07:33:04Z - AUDCLO - EBIRD - HumanObservation - 2 - http://guid.mvz.org/events/2006/11/27/6 - - - Anthus hellmayri - Aves - Anthus - hellmayri - urn:catalog:AUDCLO:EBIRD:OBS64515331 - - \ No newline at end of file diff --git a/examples/xml/example_classes_specimen.xml b/examples/xml/example_classes_specimen.xml deleted file mode 100644 index e761fa7..0000000 --- a/examples/xml/example_classes_specimen.xml +++ /dev/null @@ -1,108 +0,0 @@ - - - - http://guid.mvz.org/sites/arg/127 - Argentina - AR - Neuquén - 25 km al NNE de Bariloche por Ruta 40 (=237) - - - http://guid.mvz.org/events/1995/6 - 1995-01-12T00:00:00 - 12 - 12 - 1995 - 01 - 12 - 12 Jan 1995 - mallín - on file in the Grinnell-Miller Library - http://guid.mvz.org/sites/arg/127 - - - PhysicalObject - 2009-02-12T12:43:31 - Museum of Vertebrate Zoology - MVZ - Mammals - urn:catalog:MVZ:Mammals:14523 - PreservedSpecimen - http://guid.mvz.org/events/1995/6 - - - http://guid.mvz.org/identifications/23459 - Richard Sage - 2000-01-01T00:00:00 - sp. - urn:catalog:MVZ:Mammals:14523 - - - Ctenomys - Ctenomys - http://guid.mvz.org/identifications/23459 - - - http://guid.mvz.org/identifications/94752 - James L Patton - 2001-09-14T00:00:00 - urn:catalog:MVZ:Mammals:14523 - - - Ctenomys sociabilis - Animalia; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Hystricognatha; Hystricognathi; Ctenomyidae; Ctenomyini; Ctenomys - Animalia - Chordata - Mammalia - Rodentia - Ctenomyidae - Ctenomys - sociabilis - http://guid.mvz.org/identifications/94752 - - - PhysicalObject - 2009-02-12T12:43:31 - Museum of Vertebrate Zoology - MVZ - Mammals - urn:catalog:MVZ:Mammals:14524 - PreservedSpecimen - http://guid.mvz.org/events/1995/6 - - - http://guid.mvz.org/identifications/94753 - James L Patton - 2001-09-14T00:00:00 - urn:catalog:MVZ:Mammals:14524 - - - Ctenomys sociabilis - Animalia; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Hystricognatha; Hystricognathi; Ctenomyidae; Ctenomyini; Ctenomys - Animalia - Chordata - Mammalia - Rodentia - Ctenomyidae - Ctenomys - sociabilis - http://guid.mvz.org/identifications/94753 - - - http://guid.mvz.org/relations/23423 - urn:catalog:MVZ:Mammals:14523 - urn:catalog:MVZ:Mammals:14524 - offspring of - - - http://guid.mvz.org/relations/23424 - urn:catalog:MVZ:Mammals:14524 - urn:catalog:MVZ:Mammals:14523 - mother of - - \ No newline at end of file diff --git a/examples/xml/example_simple.xml b/examples/xml/example_simple.xml deleted file mode 100644 index 47f211a..0000000 --- a/examples/xml/example_simple.xml +++ /dev/null @@ -1,176 +0,0 @@ - - - - - - - - PhysicalObject - 2009-02-12T14:22:00Z - en - http://creativecommons.org/publicdomain/zero/1.0/legalcode - Museum of Vertebrate Zoology, UC Berkeley - http://www.vertnet.org/resources/norms.html - - http://arctos.database.museum/guid/MVZ:Mamm:165861 - http://biocol.org/urn:lsid:biocol.org:col:34777 - http://grbio.org/cool/0rht-pj95 - - MVZ - Mammals - - - PreservedSpecimen - - - {'tragusLengthInMeters':'0.014', 'weightInGrams':'120', 'zygomaticArchWidthInMeters':'0.043'} - urn:occurrence:Arctos:MVZ:Mamm:165861:101356 - 165861 - OPP 7101 - Oliver P. Pearson | Anita K. Pearson - 1 - female - adult - non-reproductive - - native - - skull | study skin | skeleton - in collection - http://arctos.database.museum/SpecimenImages/UAMObs/Mamm/2/P7291179.JPG - http://www.sciencemag.org/cgi/content/abstract/322/5899/261 - GenBank: U34853.1 - - - - http://arctos.database.museum/guid/MVZ:Mamm:165861 - - - - - Ctenomys sociabilis (accepted ID) identified by Oliver P. Pearson on 1999-01-27; method: type specimen | Ctenomys sociabilis identified by Oliver P. Pearson on 1985 sensu Pearson 1985; method: type specimen Remark: ID from citation in Pearson 1985." - - - - 1983-11-16 - 14:07-03:00 - 315 - 315 - 1983 - 11 - 16 - Nov. 11 '83 - pre-cordilleran steppe - snap trap - 4 trap hours - stored in Grinnell-Miller Library - particularly dry season - - urn:location:TGN:1001450 - South America | Argentina | Parque Nacional Nahuel Huapi | Neuquén | Los Lagos - South America - - - - Argentina - AR - Neuquén - Los Lagos - - Estancia Fortin Chacabuco, 3 km S and 2 km W Cerro Puntudo - Estancia Fortin Chacabuco, 3 km S and 2 km W Co. Puntudo - 1070 - 1080 - 1075m - - - - - - - The colony was just N of the fence and just E of the stream according to Michael Christie, who verified on Google Earth (about 40. 58' 06 to 07" and 71. 11' 30 to 31"). - -40.9684722 - -71.1918056 - EPSG:4326 - 7 - 0.0000001 - 1 - -40.9684722/-71.1918056 - -40.9684722 - -71.1918056 - decimal degrees - WGS84 - - - - John Wieczorek (MVZ) - 2011-11-18 - Guide to Best Practices for Georeferencing. (Chapman and Wieczorek, eds. 2006). Global Biodiversity Information Facility. - Garmin Etrex Summit GPS - verified by collector - coordinate uncertainty determined by GPS accuracy reading at the time the waypoint was recorded - - Phanerozoic - Phanerozoic - Cenozoic - Cenozoic - Quaternary - Quaternary - Holocene - Holocene - Atlantic - Atlantic - - - - - - - - - holotype - Oliver P. Pearson - 1999-01-27 - - type specimen - - - - - - - - - - Ctenomys sociabilis - Ctenomys sociabilis Pearson and Christie, 1985 - Ctenomys Blainville, 1826 - Ctenomys sociabilis Pearson and Christie, 1985 - Pearson O. P., and M. I. Christie. 1985. - Pearson O. P., and M. I. Christie. 1985. Historia Natural, 5(37):388 - 1985 - Animalia | Chordata | Vertebrata | Mammalia | Theria | Eutheria | Rodentia | Hystricognatha | Hystricognathi | Ctenomyidae | Ctenomyini | Ctenomys - Animalia - Chordata - Mammalia - Rodentia - Ctenomyidae - Ctenomys - - sociabilis - - species - - Pearson and Christie, 1985 - colonial tuco-tuco - ICZN - valid - - - -