274 lines
5.8 KiB
Plaintext
274 lines
5.8 KiB
Plaintext
head 1.7;
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access ;
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symbols;
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locks; strict;
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comment @@;
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1.7
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date 2006.07.06.06.03.30; author DonovanSharp; state Exp;
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branches;
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next 1.6;
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1.6
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date 2006.07.06.03.53.23; author KevinThiele; state Exp;
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branches;
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next 1.5;
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1.5
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date 2006.07.05.04.54.05; author DonovanSharp; state Exp;
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branches;
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next 1.4;
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1.4
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date 2006.07.04.02.10.26; author DonovanSharp; state Exp;
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branches;
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next 1.3;
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1.3
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date 2006.06.23.06.41.32; author DonovanSharp; state Exp;
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branches;
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next 1.2;
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1.2
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date 2006.06.05.00.37.27; author DonovanSharp; state Exp;
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branches;
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next 1.1;
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1.1
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date 2006.06.02.04.23.00; author DonovanSharp; state Exp;
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branches;
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next ;
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desc
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@@
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1.7
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log
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@@
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text
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@%META:TOPICINFO{author="DonovanSharp" date="1152165810" format="1.1" reprev="1.7" version="1.7"}%
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%META:TOPICPARENT{name="SddContents"}%
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---++SDD Part 0: Introduction and Primer to the SDD Standard
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---+++4.4 Elements of structured summary data in SDD.
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A coded description requires three essential items: the names of the taxa being described, the terminology (characters and states) used to describe the taxa, and the coded descriptions themselves
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<img src="%ATTACHURLPATH%/coded_data.gif"/>
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An SDD instance document for coded summary data has the basic structure shown in Example 4.4.1.
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---++++Example 4.4.1 - SDD structure of coded descriptions
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<table bgcolor="#ddddff" border="0" width="80%" cellpadding="5" cellspacing="5" style="border-collapse: collapse" bordercolor="#111111">
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<tr>
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<td>
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<verbatim>
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<Datasets>
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<Dataset>
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<TaxonNames>
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... provides a list of the entities (usually taxa) described
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</TaxonNames>
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<TaxonHierarchies>
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... optional element to describe relationships between entities
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</TaxonHierarchies>
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<DescriptiveTerminology>
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... provides the terminology and ontology used to describe the
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entities (see DescriptiveConcepts, SddCharacters, CharacterTrees)
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</DescriptiveTerminology>
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<CodedDescriptions>
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<SummaryData>
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... the actual descriptions
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</SummaryData>
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</CodedDescriptions>
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<MediaResources>
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... optional element providing media (images, video, audio etc.) associated with
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any of the above
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</MediaResources>
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</Dataset>
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</Datasets>
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</verbatim>
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</td>
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</tr>
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</table>
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Optional elements allow the taxa to be arranged into a hierarchy, and the recording of media files (images etc) for taxa or characters.
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---++++Example 4.4.1 - A simple summary description of a taxon (<i>Korthalsella</i>)
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<verbatim>
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<CodedDescriptions>
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<CodedDescription id="cd1">
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<Representation>
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<Label>Korthalsella</Label>
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</Representation>
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<Scope>
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<TaxonName ref="t2"/>
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</Scope>
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<SummaryData>
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<Categorical ref="c3">
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<State ref="s7"/>
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</Categorical>
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<Categorical ref="c1">
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<State ref="s2"/>
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</Categorical>
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<Quantitative ref="c4">
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<Measure type="Min" value="5.0"/>
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<Measure type="UMethUpper" value="10.0"/>
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<Measure type="UMethlower" value="20.0"/>
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<Measure type="Max" value="25.0"/>
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</Quantitative>
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</SummaryData>
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</CodedDescription>
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</CodedDescriptions>
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</verbatim>
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</td>
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</tr>
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</table>
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-- Main.DonovanSharp - 02 Jun 2006
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%META:FILEATTACHMENT{name="coded_data.gif" attr="" autoattached="1" comment="Wire diagram for coded data" date="1152157093" path="coded_data.gif" size="19803" user="Main.KevinThiele" version="1"}%
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%META:FILEATTACHMENT{name="summarydata.jpg" attr="" autoattached="1" comment="" date="1151044814" path="summarydata.jpg" size="14449" user="Main.DonovanSharp" version="1"}%
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@
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1.6
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log
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@@
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text
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@d1 1
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a1 1
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%META:TOPICINFO{author="KevinThiele" date="1152158003" format="1.1" reprev="1.6" version="1.6"}%
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d15 1
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a15 1
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<div>
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d17 1
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a17 1
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<pre>
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d20 1
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d54 1
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a54 1
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</pre>
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a55 1
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</div>
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d59 1
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d64 2
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d93 6
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@
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1.5
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log
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@@
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text
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@d1 1
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a1 1
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%META:TOPICINFO{author="DonovanSharp" date="1152075245" format="1.1" version="1.5"}%
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d5 1
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a5 1
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---+++4.4 SDD for coded summary data
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d7 1
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a7 2
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Summary data for aggregated or summarized data (using statistical measures, state distributions, ranges etc.). The element is optional to support descriptions containing only sample data or media objects.
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Note: Characters are NOT required to have unique ref attributes! Data for one character may be recorded with different modifications (in spring/autumn, at tip/base).
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d9 1
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a9 1
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%ATTACHURL%/summarydata.jpg
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d11 1
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a11 1
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---++++Example 4.4.1 - A simple summary data description
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d13 7
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a19 1
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d21 16
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d38 27
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a88 1
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d90 3
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d92 2
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a93 4
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* Wire diagram for coded data: <br />
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<img src="%ATTACHURLPATH%/coded_data.gif" alt="coded_data.gif" width='550' height='204' />
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%META:FILEATTACHMENT{name="summarydata.jpg" attachment="summarydata.jpg" attr="" comment="" date="1151044813" path="summarydata.jpg" size="14449" stream="summarydata.jpg" user="Main.DonovanSharp" version="1"}%
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@
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1.4
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log
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@@
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text
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@d1 1
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a1 1
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%META:TOPICINFO{author="DonovanSharp" date="1151979026" format="1.1" version="1.4"}%
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d34 1
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a34 1
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<Measure type="UMethUpper" value="20.0"/>
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@
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1.3
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log
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@@
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text
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@d1 1
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a1 1
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%META:TOPICINFO{author="DonovanSharp" date="1151044892" format="1.1" reprev="1.3" version="1.3"}%
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d5 1
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a5 1
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---+++3.5 SDD for coded summary data
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d12 1
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a12 1
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---++++Example 3.3.1 - A simple summary data description
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@
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1.2
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log
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@@
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@d1 1
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a1 1
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%META:TOPICINFO{author="DonovanSharp" date="1149467847" format="1.1" version="1.2"}%
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d7 5
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d19 1
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a19 1
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<Label xml:lang="en-us">Korthalsella</Label>
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d44 3
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@
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1.1
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log
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text
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@d1 1
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a1 1
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%META:TOPICINFO{author="DonovanSharp" date="1149222180" format="1.1" reprev="1.1" version="1.1"}%
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d3 1
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a3 1
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SDD Part 0: Introduction and Primer to the SDD Standard
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d5 1
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a5 2
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3.5 SDD for coded summary data
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Example 3.3.1 - A simple summary data description
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d7 2
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a38 1
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@
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