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Add missing dwc:vitality to extension definitions. 

Tidy README.
This commit is contained in:
Matthew Blissett 2024-02-19 16:03:07 +01:00
parent fbc2f3c8d8
commit 3ff51687b3
2 changed files with 20 additions and 17 deletions
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32
README.md
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@ -25,19 +25,20 @@ The repository structure is described below. Files/directories indicated with `G
``` ```
├── .github ├── .github
│ ├── ISSUE_TEMPLATE : Directory of issue templates generated by GitHub │ ├── ISSUE_TEMPLATE : Directory of issue templates generated by GitHub
│ ├── CONTRIBUTING.md : Guide on how to contribute, create issues, etc. │ └── CONTRIBUTING.md : Guide on how to contribute, create issues, etc.
│ │
├── build ├── build
│ ├── doe-cv-build : Directory of build scripts for the degreeOfEstablishment controlled vocabulary │ ├── doe-cv-build : Directory of build scripts for the degreeOfEstablishment controlled vocabulary
│ ├── dwc_terms_guides_rdf : Directory containing editable template for generating RDF guide │ ├── dwc_terms_guides_rdf : Directory containing editable template for generating RDF guide
│ ├── dwc_terms_guides_text : Directory containing editable template for generating text guide │ ├── dwc_terms_guides_text : Directory containing editable template for generating text guide
│ ├── dwc_terms_guides_xml : Directory containing editable template for generating XML guide │ ├── dwc_terms_guides_xml : Directory containing editable template for generating XML guide
│ ├── dwc_terms_namespace : Directory containing editable template for generating namespace policy │ ├── dwc_terms_namespace : Directory containing editable template for generating namespace policy
│ ├── dwc_terms_simple : Directory containing editable template for generating Simple DwC guide │ ├── dwc_terms_simple : Directory containing editable template for generating Simple DwC guide
│ ├── em-cv-build : Directory of build scripts for the establishmentMeans controlled vocabulary │ ├── doe-cv-build : Directory of build scripts for the degreeOfEstablishment controlled vocabulary
│ ├── pw-cv-build : Directory of build scripts for the pathway controlled vocabulary │ ├── em-cv-build : Directory of build scripts for the establishmentMeans controlled vocabulary
│ ├── xml : Directory for build script and configs for XML extension definitions │ ├── pw-cv-build : Directory of build scripts for the pathway controlled vocabulary
│ ├── ext : Directory of GENERATED XML extension definitions │ ├── xml : Directory of build script and configs for XML extension definitions
│ ├── ext : Directory for GENERATED XML extension definitions
│ ├── README.md : Workflow for generating a new version of the vocabulary │ ├── README.md : Workflow for generating a new version of the vocabulary
│ ├── build_other_doc_header.py : Script to build non-list of terms documents from their editable templates │ ├── build_other_doc_header.py : Script to build non-list of terms documents from their editable templates
│ ├── build-termlist.ipynb : Obsolete Juyter notebook to construct the term list (morphed to .py version) │ ├── build-termlist.ipynb : Obsolete Juyter notebook to construct the term list (morphed to .py version)
@ -51,10 +52,11 @@ The repository structure is described below. Files/directories indicated with `G
│ ├── terms.tmpl : A Jinja2 template to format the Quick Reference Guide │ ├── terms.tmpl : A Jinja2 template to format the Quick Reference Guide
│ ├── update_previous_doc.py : Script to move current doc to a version and update version links in it │ ├── update_previous_doc.py : Script to move current doc to a version and update version links in it
│ └── workflow_diagram.png : Figure used in README.md to show how to create a new version of the standard │ └── workflow_diagram.png : Figure used in README.md to show how to create a new version of the standard
│
├── dist : GENERATED Distribution files generated by build.py ├── dist : GENERATED Distribution files generated by build.py
│   ├── all_dwc_vertical.csv : GENERATED CSV file with all Darwin Core terms as a column │ ├── all_dwc_vertical.csv : GENERATED CSV file with all Darwin Core terms as a column
│   ├── simple_dwc_horizontal.csv : GENERATED CSV file with Simple Darwin Core terms as a row │ ├── simple_dwc_horizontal.csv : GENERATED CSV file with Simple Darwin Core terms as a row
│   └── simple_dwc_vertical.csv : GENERATED CSV file with Simple Darwin Core terms as a column │ └── simple_dwc_vertical.csv : GENERATED CSV file with Simple Darwin Core terms as a column
│ │
├── docs (GENERATED except for index.md) ├── docs (GENERATED except for index.md)
│ ├── doe : Degree of Establishment Controlled Vocabulary List of Terms │ ├── doe : Degree of Establishment Controlled Vocabulary List of Terms
@ -73,7 +75,7 @@ The repository structure is described below. Files/directories indicated with `G
│ └── index.md : Website home page (manually maintained) │ └── index.md : Website home page (manually maintained)
│ │
├── vocabulary ├── vocabulary
│ └── term_versions.csv : Darwin Core term versions, contains the complete history of the terms │ └── term_versions.csv : GENERATED Darwin Core term versions, contains the complete history of the terms
│ │
├── .gitignore : Files and directories to be ignored by git ├── .gitignore : Files and directories to be ignored by git
├── LICENSE : Repository license ├── LICENSE : Repository license

1
build/xml/occurrence_core_list.csv
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@ -31,6 +31,7 @@ Occurrence,http://rs.tdwg.org/dwc/terms/lifeStage,,,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/reproductiveCondition,,,,,, Occurrence,http://rs.tdwg.org/dwc/terms/reproductiveCondition,,,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/caste,,,,,, Occurrence,http://rs.tdwg.org/dwc/terms/caste,,,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/behavior,,,,,, Occurrence,http://rs.tdwg.org/dwc/terms/behavior,,,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/vitality,,,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/establishmentMeans,,http://rs.gbif.org/vocabulary/dwc/establishment_means_2022-02-02.xml,,,, Occurrence,http://rs.tdwg.org/dwc/terms/establishmentMeans,,http://rs.gbif.org/vocabulary/dwc/establishment_means_2022-02-02.xml,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/degreeOfEstablishment,,http://rs.gbif.org/vocabulary/dwc/degree_of_establishment_2022-02-02.xml,,,, Occurrence,http://rs.tdwg.org/dwc/terms/degreeOfEstablishment,,http://rs.gbif.org/vocabulary/dwc/degree_of_establishment_2022-02-02.xml,,,,
Occurrence,http://rs.tdwg.org/dwc/terms/pathway,,http://rs.gbif.org/vocabulary/dwc/pathway_2022-02-02.xml,,,, Occurrence,http://rs.tdwg.org/dwc/terms/pathway,,http://rs.gbif.org/vocabulary/dwc/pathway_2022-02-02.xml,,,,

1 group iri type thesaurus description comments examples required
31 Occurrence http://rs.tdwg.org/dwc/terms/reproductiveCondition
32 Occurrence http://rs.tdwg.org/dwc/terms/caste
33 Occurrence http://rs.tdwg.org/dwc/terms/behavior
34 Occurrence http://rs.tdwg.org/dwc/terms/vitality
35 Occurrence http://rs.tdwg.org/dwc/terms/establishmentMeans http://rs.gbif.org/vocabulary/dwc/establishment_means_2022-02-02.xml
36 Occurrence http://rs.tdwg.org/dwc/terms/degreeOfEstablishment http://rs.gbif.org/vocabulary/dwc/degree_of_establishment_2022-02-02.xml
37 Occurrence http://rs.tdwg.org/dwc/terms/pathway http://rs.gbif.org/vocabulary/dwc/pathway_2022-02-02.xml